For some basic sequence analysis CLC Sequence Viewer works great. Plasma DNA is another free software for windows and Mac. Free for windows and Mac, online and offline. Program for faster alignment of short oligonucleotides onto reference sequences for next generation sequencing data analysis. Sequence Manipulation Suite: JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. Superlink: Genetic linkage analysis with input-output relationships similar to those in standard.

• Free Dna Sequence Analysis Software For Mac Free
• Free Dna Sequence Analysis Software For Mac
• Free Dna Sequence Analysis Software For Mac Download
• Free Dna Sequence Analysis Software For Mac Computers
• Dna Editing Software

What is Sequence Analysis for Mac. Sequence Analysis is sequence editing, reverse complement, protein translation, ORF finding, secondary structure, composition, isoelectric point, primer design, pairwise comparison, publish layout and sequence reformatting. Fetches sequence entries directly from the NCBI via Accession number or GID. There are many applications for opening DNA sequence files on the PC, but few exist for opening them on the Mac. Furthermore, none of the existing software will generate quality reports for your DNA sequence chromatograms. To use this DNA sequence analysis software, simply drag and drop chromatogram files onto the program's icon. DNADynamo DNA sequencing and Analysis Software is easy to use. Import or retrieve annotated sequence files from a variety of formats and online databases. Assemble sequencing data, analyse mutations, and export the results. Design cloning strategies, design primers, and create beautiful plasmid maps that can be edited and adjusted any way you want. Supports DNA and Protein multiple sequence.

Create Quality Reports from AB1 files, Open Chromatograms and more!

If you want to open AB1 DNA Sequence files, and generate detailed Quality reports on your Mac, you have come to the right place. There are many applications for opening DNA sequence files on the PC, but few exist for opening them on the Mac. Furthermore, none of the existing software will generate quality reports for your DNA sequence chromatograms.

To use this DNA sequence analysis software, simply drag and drop chromatogram files onto the program's icon. In a few seconds, the program will generate a quality report, and open it in your default browser. We recommend using Safari to analyze your DNA chromatograms, but Firefox will display the AB1 files as well (you may need to click once in the chromatogram window for it to display).

Screen Shot of Mac Sequence View

Above, you can see the simple, easy to read output screen of Mac Sequence View. Your DNA sequences have been analyzed, and the data from the chromatograms has been converted into a color coded table. The sample name becomes a link which you can click to pop open a new window displaying the raw DNA sequence. We report a sample score (assigned by ABI on a scale of 0 to 60), the signal to noise ratio, the read length, and the ratio of Low, Medium, and High Quality Basecalls.

Screen Shot of Chromatogram Viewer

All you have to do is click the Sample name to pop up a view of the chromatogram as seen above. We also provide a link to quickly translate all of your AB1 files into a single FASTA file. We also provide you with quick, easy links to BLAST, VecScreen, and a detailed Help Menu.

If you do not have a Mac, we recommend ABIs DNA Sequence Scanner Software This program will generate a quality report (similar to ours) but on your PC. The only disadvantage with their software is that it is much slower than ours. They also offer DNA Sequence Analysis software. This software is much more expensive than ours, but it will run on a Windows PC.

Page Last modified: September 29, 2013

Buy Mac Sequence View Suite ↓

Please Contact Us if you need to use a PO to purchase this software. The Mac Sequence View Suite software is available for immediate download after purchase. Once you have completed your transaction on PayPal's website, return to GOTOES.ORG to obtain the Mac Sequence View Suite software. A link is also sent by email. If you do not get the email, check your junk mail filter!
This is a software suite. You get all 3 programs with this purchase.

Overview of Major Features

If you already own an older copy of MacVector, and would like to know what new features have been added since the version you own, you can find that information on this summary page.

Graphical Sequence Editing

MacVector can read and write DNA and Protein sequences in most popular file formats. In addition to directly editing sequences and features/annotations, MacVector has an intuitive 'Click Cloning' graphical interface that lets you easily replicate laboratory cloning experiments to create new molecules. MacVector uses the native Mac OS X Quartz graphics to generate publication quality images that can be scaled to any size with no loss of resolution. More details...

Gateway and Topo Cloning

MacVector supports the popular Gateway, TOPO TA and Zero Blunt cloning technologies from Invitrogen. With a few simple clicks from an intuitive graphical interface, you can replicate your biological manipulations at the bench to create new molecules with the correct sequences across the cloning and recombination junctions. More details...

Free Dna Sequence Analysis Software For Mac Free

Auto Annotation

You can scan an unannotated or partially annotated sequence against a folder on your hard drive and MacVector will identify matching features in sequences in the target folder and add them to your sequence. Because MacVector includes custom feature appearance information when annotating the sequence, you can use this to maintain a carefully curated set of your favorite genes and sequences each with a graphical appearance that best suits your needs. More details...

Primer Design

You can design primers for either PCR or Sequencing/Hybridization probes using a variety of primer design functions, including an interactive manual design interface along with several scanning functions such as the popular Primer3 algorithm. The interactive interface clearly shows which potential primers may have secondary structure problems, alternate binding sites or other characteristics that might impact their use in experiments. More details...

DNA Analysis

MacVector provides a wide variety of useful DNA analysis tools, including base composition analysis, Restriction Enzyme searches, DNA Subsequence searches and 'Dot-Plot' comparisons between DNA:DNA and DNA:Protein sequences. A Coding Preference toolbox lets you select a variety of algorithms to graphically scan a DNA sequence for likely protein coding open reading frames. More details...

Protein Analysis

Protein sequences can be reverse translated into DNA, compared using 'Dot-Plot' analysis and scanned for Proteolytic cleavage sites and amino acid sequence motifs. A comprehensive Protein Analysis Toolbox provides a wide variety of algorithms for analyzing the composition of proteins and presenting the results in graphical and tabular formats. More details...

Database Searching

Free Dna Sequence Analysis Software For Mac

MacVector has built-in Internet connectivity to the NCBI BLAST and Entrez databases. You can directly search Entrez for DNA or Protein sequences based on features, authors, keywords etc and directly download them into MacVector, complete with all features and annotations. The built-in BLAST interface lets you submit multiple BLAST jobs using DNA or Protein sequences and then download any matching sequences by selecting them from a hit list. Even without an Internet connection, MacVector can align sequences against any folder on your hard drive using a FastA algorithm, allowing for 'local' database searches. More details...

Free Dna Sequence Analysis Software For Mac Download

Multiple Sequence Alignment

You can align unlimited numbers of DNA or Protein sequences using the ClustalW algorithm built in to MacVector. A full-featured editor lets you make manual adjustments to the alignments and view them using a wide variety of customizable color schemes. You can create publication quality graphical outputs of the alignments and view pairwise combinations of the sequences in aligned and matrix formats. More details...

Sequence Assembly

Sequence Assembly functionality in MacVector is now provided by two modules. First there is a built-in function called Align To Reference. This can be used for two different functions, Sequence Confirmation and cDNA Alignment. This is included with MacVector and allows you to import trace files or sequence files and assemble them against a template sequence. This is ideal for small scale sequencing projects, especially resequencing. For example, checking an in situ mutagenesis experiment, a construct you've just made, or confirming the sequence of a cloned PCR fragment. It's also an excellent tool for SNP analysis, with some special tools to allow you to easily spot mutations from your original template sequence.

Free Dna Sequence Analysis Software For Mac Computers

For full scale sequencing projects where you do not know the sequence you'll need MacVector and a separately purchased plugin called Assembler. This is a full contig assembly application that uses the phred, phrap and cross_match algorithms from the University of Washington to assembles traces into contigs. It displays full quality scores of the reads and the aligned contigs. The trial version of MacVector also includes the Assembler plugin. Click here to go to the Assembler product page.

Dna Editing Software

Please note that AssemblyLIGN is no longer included with MacVector.